Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_11520 | Not Available | Positive | 2859745 - 2859927 | 6740.57 |
| 2-isopropylmalate synthase | DW150_11525 | Not Available | Positive | 2860755 - 2862251 | 54463.1 |
| 3-isopropylmalate dehydratase large subunit | DW150_11530 | Not Available | Positive | 2862269 - 2863651 | 50037.1 |
| 3-isopropylmalate dehydratase small subunit | DW150_11535 | Not Available | Positive | 2863665 - 2864261 | 22389.5 |
| 2-isopropylmalate synthase | DW150_11540 | Not Available | Positive | 2864267 - 2865787 | 56805.1 |
| 3-isopropylmalate dehydrogenase | DW150_11545 | Not Available | Positive | 2865881 - 2866942 | 39118.0 |
| ahpc/tsa family protein | DW150_11550 | Not Available | Positive | 2867074 - 2868219 | 43015.7 |
| peptide-methionine (s)-s-oxide reductase | DW150_11555 | Not Available | Negative | 2868288 - 2868773 | 18655.1 |
| hypothetical protein | DW150_11560 | Not Available | Positive | 2868890 - 2869744 | 32638.5 |
| dna helicase recq | DW150_11565 | Not Available | Negative | 2869840 - 2871657 | 69080.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

