Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW150_11025 | Not Available | Positive | 2718169 - 2720484 | 86923.7 |
| hypothetical protein | DW150_11030 | Not Available | Positive | 2721116 - 2721499 | 14547.6 |
| hypothetical protein | DW150_11035 | Not Available | Positive | 2721519 - 2721872 | 13377.9 |
| hypothetical protein | DW150_11040 | Not Available | Positive | 2722097 - 2722297 | 7208.15 |
| hypothetical protein | DW150_11050 | Not Available | Positive | 2723639 - 2723869 | 8893.67 |
| hypothetical protein | DW150_11055 | Not Available | Positive | 2724001 - 2726274 | 86245.4 |
| hypothetical protein | DW150_11070 | Not Available | Positive | 2729805 - 2730035 | 8893.67 |
| radical sam protein | DW150_11080 | Not Available | Positive | 2732035 - 2733360 | 51795.7 |
| tonb-dependent receptor | DW150_11085 | Not Available | Positive | 2733378 - 2735708 | 87905.5 |
| carboxypeptidase regulatory-like domain-containing protein | DW150_11090 | Not Available | Positive | 2735756 - 2735950 | 6766.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

