Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase c39 | DW150_10975 | Not Available | Negative | 2707041 - 2707622 | 23420.5 |
| radical sam protein | DW150_10980 | Not Available | Negative | 2707615 - 2709126 | 58136.2 |
| hypothetical protein | DW150_10985 | Not Available | Negative | 2709104 - 2709307 | 7520.4 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW150_10990 | Not Available | Negative | 2709357 - 2710502 | 43680.2 |
| peptidase domain-containing abc transporter | DW150_10995 | Not Available | Negative | 2710551 - 2712752 | 83521.6 |
| hypothetical protein | DW150_11000 | Not Available | Negative | 2712749 - 2713663 | 35539.9 |
| hypothetical protein | DW150_11005 | Not Available | Negative | 2713696 - 2713935 | 9362.56 |
| duf3244 domain-containing protein | DW150_11010 | Not Available | Negative | 2713969 - 2714382 | 15336.3 |
| hypothetical protein | DW150_11015 | Not Available | Negative | 2714546 - 2716441 | 73799.2 |
| radical sam protein | DW150_11020 | Not Available | Positive | 2717091 - 2718146 | 40393.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

