Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DW150_10825 | Not Available | Negative | 2659056 - 2660129 | 39176.2 |
| flavodoxin family protein | DW150_10830 | Not Available | Negative | 2660365 - 2660907 | 20020.9 |
| iron-containing alcohol dehydrogenase | DW150_10835 | Not Available | Negative | 2660934 - 2662115 | 42802.4 |
| aldo/keto reductase | DW150_10840 | Not Available | Negative | 2662138 - 2663106 | 35862.7 |
| arac family transcriptional regulator | DW150_10845 | Not Available | Negative | 2663248 - 2664084 | 32646.6 |
| mechanosensitive ion channel family protein | DW150_10850 | Not Available | Positive | 2664254 - 2665447 | 45188.9 |
| sensor histidine kinase | DW150_10855 | Not Available | Negative | 2665566 - 2667062 | 56829.7 |
| tonb-dependent receptor | DW150_10860 | Not Available | Positive | 2667218 - 2669542 | 88548.2 |
| duf1232 domain-containing protein | DW150_10865 | Not Available | Positive | 2669687 - 2670049 | 13930.1 |
| tonb-dependent receptor | DW150_10870 | Not Available | Positive | 2670490 - 2673735 | 119653.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

