Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_10775 | Not Available | Positive | 2647087 - 2648151 | 40270.2 |
| hypothetical protein | DW150_10780 | Not Available | Positive | 2648148 - 2648726 | 22822.9 |
| signal peptidase i | DW150_10785 | Not Available | Positive | 2648723 - 2649544 | 31907.5 |
| hypothetical protein | DW150_10790 | Not Available | Positive | 2649698 - 2650240 | 19650.0 |
| tolc family protein | DW150_10795 | Not Available | Positive | 2650372 - 2651769 | 51934.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW150_10800 | Not Available | Positive | 2651824 - 2652954 | 41328.5 |
| multidrug efflux rnd transporter permease subunit | DW150_10805 | Not Available | Positive | 2652959 - 2656075 | 112544.0 |
| sdr family nad(p)-dependent oxidoreductase | DW150_10810 | Not Available | Negative | 2656291 - 2657082 | 27845.6 |
| quinone oxidoreductase | DW150_10815 | Not Available | Negative | 2657135 - 2658121 | 36084.0 |
| aldo/keto reductase | DW150_10820 | Not Available | Negative | 2658168 - 2658986 | 31068.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

