Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit s | DW150_10725 | Not Available | Negative | 2635270 - 2636514 | 47252.8 |
| n-6 dna methylase | DW150_10730 | Not Available | Negative | 2636527 - 2638503 | 74612.1 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | DW150_10735 | Not Available | Negative | 2638802 - 2640019 | 46318.2 |
| duf2027 domain-containing protein | DW150_10740 | Not Available | Positive | 2640084 - 2641172 | 41086.4 |
| paai family thioesterase | DW150_10745 | Not Available | Positive | 2641200 - 2641610 | 14765.8 |
| histidine decarboxylase | DW150_10750 | Not Available | Negative | 2641690 - 2642298 | 22183.6 |
| acyl-coa dehydrogenase | DW150_10755 | Not Available | Negative | 2642757 - 2644463 | 63878.1 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DW150_10760 | Not Available | Negative | 2644463 - 2645482 | 36698.3 |
| electron transfer flavoprotein beta subunit/fixa family protein | DW150_10765 | Not Available | Negative | 2645488 - 2646381 | 31873.2 |
| hypothetical protein | DW150_10770 | Not Available | Positive | 2646748 - 2647008 | 9561.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

