Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glycosidase | DW150_10460 | Not Available | Positive | 2540291 - 2541889 | 59599.5 |
| xylanase | DW150_10465 | Not Available | Positive | 2541902 - 2543467 | 59560.3 |
| laci family transcriptional regulator | DW150_10470 | Not Available | Negative | 2543548 - 2544570 | 38256.6 |
| alkyl hydroperoxide reductase subunit f | DW150_10475 | Not Available | Negative | 2544710 - 2546260 | 56081.8 |
| peroxiredoxin | DW150_10480 | Not Available | Negative | 2546273 - 2546839 | 21053.1 |
| phosphopyruvate hydratase | DW150_10485 | Not Available | Positive | 2547080 - 2548360 | 46024.9 |
| magnesium transporter cora family protein | DW150_10495 | Not Available | Positive | 2548647 - 2549570 | 35582.5 |
| pepsy domain-containing protein | DW150_10500 | Not Available | Negative | 2549649 - 2550860 | 46074.5 |
| duf4374 domain-containing protein | DW150_10505 | Not Available | Negative | 2550877 - 2552277 | 51003.5 |
| tonb-dependent receptor | DW150_10510 | Not Available | Negative | 2552335 - 2554722 | 89662.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

