Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DW150_09840 | Not Available | Negative | 2379218 - 2380651 | 53909.1 |
| hypothetical protein | DW150_09845 | Not Available | Negative | 2380714 - 2382912 | 86181.9 |
| glutamine synthetase type iii | DW150_09850 | Not Available | Positive | 2383088 - 2385277 | 82847.0 |
| crp/fnr family transcriptional regulator | DW150_09855 | Not Available | Positive | 2385439 - 2386140 | 26605.4 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | DW150_09860 | Not Available | Positive | 2386270 - 2386422 | 5511.84 |
| ferritin | DW150_09865 | Not Available | Positive | 2386455 - 2386967 | 19740.4 |
| 3-deoxy-8-phosphooctulonate synthase | DW150_09870 | Not Available | Negative | 2387128 - 2387925 | 28835.3 |
| yegs/rv2252/bmru family lipid kinase | DW150_09875 | Not Available | Negative | 2387998 - 2388927 | 35331.0 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DW150_09880 | Not Available | Negative | 2388933 - 2389856 | 35790.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DW150_09885 | Not Available | Negative | 2389978 - 2390988 | 35961.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

