Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4981 domain-containing protein | DW150_08650 | Not Available | Negative | 2112285 - 2115476 | 122076.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW150_08655 | Not Available | Negative | 2115606 - 2117105 | 55427.3 |
| tonb-dependent receptor | DW150_08660 | Not Available | Negative | 2117131 - 2120205 | 113247.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW150_08665 | Not Available | Negative | 2120417 - 2121862 | 54484.2 |
| tonb-dependent receptor | DW150_08670 | Not Available | Negative | 2121884 - 2125003 | 115415.0 |
| transporter | DW150_08675 | Not Available | Negative | 2125271 - 2126869 | 56704.7 |
| duf4982 domain-containing protein | DW150_08680 | Not Available | Negative | 2126960 - 2131264 | 163212.0 |
| xre family transcriptional regulator | DW150_08685 | Not Available | Negative | 2131353 - 2131604 | 9140.92 |
| hypothetical protein | DW150_08690 | Not Available | Negative | 2131810 - 2134428 | 98648.4 |
| site-specific integrase | DW150_08695 | Not Available | Positive | 2134726 - 2135655 | 35926.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

