Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf308 domain-containing protein | DW150_06440 | Not Available | Positive | 1629418 - 1629984 | 20304.0 |
| duf4891 domain-containing protein | DW150_06445 | Not Available | Positive | 1629995 - 1630393 | 14928.4 |
| s9 family peptidase | DW150_06450 | Not Available | Positive | 1630482 - 1632932 | 91214.0 |
| arac family transcriptional regulator | DW150_06455 | Not Available | Negative | 1633072 - 1633917 | 32424.7 |
| efflux rnd transporter periplasmic adaptor subunit | DW150_06460 | Not Available | Positive | 1634082 - 1635137 | 38697.3 |
| acrb/acrd/acrf family protein | DW150_06465 | Not Available | Positive | 1635156 - 1638203 | 112533.0 |
| tolc family protein | DW150_06470 | Not Available | Positive | 1638203 - 1639495 | 48422.8 |
| hypothetical protein | DW150_06475 | Not Available | Positive | 1639643 - 1640830 | 45373.0 |
| duf1705 domain-containing protein | DW150_06480 | Not Available | Positive | 1640817 - 1642523 | 64974.3 |
| d-xylose transporter xyle | DW150_06485 | Not Available | Positive | 1642574 - 1644019 | 52874.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

