Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialidase | DW150_06065 | Not Available | Positive | 1543503 - 1545143 | 60321.3 |
| beta-n-acetylhexosaminidase | DW150_06070 | Not Available | Positive | 1545147 - 1547153 | 77120.5 |
| sialate o-acetylesterase | DW150_06075 | Not Available | Positive | 1547155 - 1547820 | 25159.8 |
| sialate o-acetylesterase | DW150_06080 | Not Available | Positive | 1547817 - 1549880 | 77723.4 |
| glycoside hydrolase family 2 protein | DW150_06085 | Not Available | Positive | 1549907 - 1552474 | 98667.6 |
| beta-n-acetylhexosaminidase | DW150_06090 | Not Available | Positive | 1552491 - 1554815 | 86775.0 |
| cyclically-permuted mutarotase family protein | DW150_06095 | Not Available | Positive | 1554910 - 1556037 | 40401.4 |
| beta-n-acetylhexosaminidase | DW150_06100 | Not Available | Positive | 1556034 - 1558088 | 76851.5 |
| glycoside hydrolase family 92 protein | DW150_06105 | Not Available | Positive | 1558115 - 1560367 | 85541.6 |
| duf4982 domain-containing protein | DW150_06110 | Not Available | Positive | 1560370 - 1562874 | 94212.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

