Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase | DW150_16445 | Not Available | + | 3956215 - 3957357 | 43148.4 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DW150_16450 | Not Available | + | 3957384 - 3959057 | 63003.1 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DW150_16455 | Not Available | + | 3959057 - 3959878 | 30339.4 |
| o-succinylbenzoate synthase | DW150_16460 | Not Available | + | 3959956 - 3961011 | 39861.1 |
| o-succinylbenzoic acid--coa ligase | DW150_16465 | Not Available | + | 3961008 - 3962093 | 40516.3 |
| arac family transcriptional regulator | DW150_16470 | Not Available | + | 3962349 - 3963233 | 34283.2 |
| duf4250 domain-containing protein | DW150_16475 | Not Available | - | 3963296 - 3963472 | 6921.42 |
| atp-dependent helicase | DW150_16480 | Not Available | - | 3963587 - 3965866 | 86524.4 |
| hypothetical protein | DW150_16485 | Not Available | - | 3965922 - 3966389 | 16988.2 |
| virulence protein e | DW150_16490 | Not Available | + | 3966575 - 3967144 | 21633.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

