Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_16145 | Not Available | Positive | 3892077 - 3892715 | 25431.6 |
| hypothetical protein | DW150_16150 | Not Available | Positive | 3892720 - 3895251 | 95913.3 |
| hypothetical protein | DW150_16155 | Not Available | Positive | 3895248 - 3895973 | 27950.4 |
| site-specific dna-methyltransferase | DW150_16160 | Not Available | Positive | 3896184 - 3896954 | 29635.7 |
| duf5045 domain-containing protein | DW150_16165 | Not Available | Positive | 3897023 - 3897793 | 28584.7 |
| hypothetical protein | DW150_16170 | Not Available | Positive | 3897808 - 3898941 | 42001.2 |
| hypothetical protein | DW150_16175 | Not Available | Positive | 3898941 - 3899360 | 17258.9 |
| conjugative transposon protein trak | DW150_16180 | Not Available | Positive | 3899367 - 3899981 | 23609.8 |
| hypothetical protein | DW150_16185 | Not Available | Positive | 3899994 - 3900365 | 14433.4 |
| adenine methyltransferase | DW150_16190 | Not Available | Positive | 3900380 - 3900862 | 18341.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

