Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | DW150_15840 | Not Available | Positive | 3833494 - 3834840 | 50939.0 |
| chloramphenicol acetyltransferase | DW150_15845 | Not Available | Positive | 3835153 - 3835788 | 24088.7 |
| had family hydrolase | DW150_15850 | Not Available | Positive | 3835825 - 3836514 | 26319.9 |
| hypothetical protein | DW150_15860 | Not Available | Negative | 3838015 - 3838716 | 25515.1 |
| k(+)-transporting atpase subunit c | DW150_15865 | Not Available | Negative | 3838989 - 3839558 | 20586.8 |
| k(+)-transporting atpase subunit b | DW150_15870 | Not Available | Negative | 3839572 - 3841605 | 72476.1 |
| potassium-transporting atpase subunit kdpa | DW150_15875 | Not Available | Negative | 3841639 - 3843345 | 61988.5 |
| potassium-transporting atpase subunit f | DW150_15880 | Not Available | Negative | 3843371 - 3843451 | 3136.13 |
| hypothetical protein | DW150_15885 | Not Available | Negative | 3843473 - 3843739 | 10150.8 |
| o-acetyl-adp-ribose deacetylase | DW150_15890 | Not Available | Positive | 3843719 - 3844345 | 22670.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

