Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_15690 | Not Available | + | 3800328 - 3801128 | 30650.3 |
| na(+)-translocating nadh-quinone reductase subunit a | DW150_15695 | Not Available | + | 3801372 - 3802721 | 49520.9 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | DW150_15700 | Not Available | + | 3802750 - 3803958 | 43554.0 |
| na(+)-translocating nadh-quinone reductase subunit c | DW150_15705 | Not Available | + | 3803972 - 3804646 | 24676.3 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | DW150_15710 | Not Available | + | 3804665 - 3805303 | 23121.2 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | DW150_15715 | Not Available | + | 3805328 - 3805924 | 21276.9 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | DW150_15720 | Not Available | + | 3805943 - 3807217 | 47078.0 |
| atp-dependent helicase | DW150_15725 | Not Available | + | 3807308 - 3808627 | 49582.0 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | DW150_15730 | Not Available | + | 3808882 - 3809952 | 39617.7 |
| 3-phosphoglycerate dehydrogenase | DW150_15735 | Not Available | + | 3810060 - 3810980 | 33189.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

