Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine decarboxylase family protein | DW150_15530 | Not Available | + | 3755886 - 3756572 | 25898.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DW150_15535 | Not Available | + | 3756584 - 3757291 | 26073.4 |
| duf4834 family protein | DW150_15540 | Not Available | + | 3757344 - 3757640 | 11362.3 |
| nucleoside deaminase | DW150_15545 | Not Available | - | 3757644 - 3758078 | 15713.2 |
| hypothetical protein | DW150_15550 | Not Available | - | 3758080 - 3758313 | 9401.63 |
| yran family protein | DW150_15555 | Not Available | + | 3758389 - 3758754 | 14167.9 |
| mmcq/yjbr family dna-binding protein | DW150_15560 | Not Available | + | 3758772 - 3759128 | 13936.8 |
| biotin--[acetyl-coa-carboxylase] ligase | DW150_15565 | Not Available | + | 3759112 - 3759879 | 29254.9 |
| peptidase s41 | DW150_15570 | Not Available | - | 3759876 - 3761315 | 54094.4 |
| mate family efflux transporter | DW150_15575 | Not Available | + | 3761474 - 3762799 | 48931.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

