Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i fructose-bisphosphate aldolase | DW150_15480 | Not Available | + | 3744850 - 3745902 | 38037.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DW150_15485 | Not Available | + | 3746064 - 3747290 | 46002.8 |
| phospholipase | DW150_15490 | Not Available | + | 3747295 - 3747714 | 15888.1 |
| metal abc transporter permease | DW150_15495 | Not Available | + | 3747770 - 3748621 | 31256.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DW150_15500 | Not Available | + | 3748605 - 3749033 | 16219.1 |
| hypothetical protein | DW150_15505 | Not Available | + | 3749095 - 3749316 | 8312.45 |
| plasmid pria4b orf-3 family protein | DW150_15510 | Not Available | - | 3749431 - 3750990 | 61008.4 |
| hypothetical protein | DW150_15515 | Not Available | - | 3751170 - 3751505 | 12878.8 |
| thioredoxin | DW150_15520 | Not Available | - | 3751541 - 3751855 | 11454.8 |
| dna polymerase iii subunit alpha | DW150_15525 | Not Available | - | 3751897 - 3755694 | 143888.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

