Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_15215 | Not Available | Negative | 3686018 - 3686872 | 31812.9 |
| hypothetical protein | DW150_15220 | Not Available | Positive | 3686879 - 3687109 | 9060.22 |
| glycosyltransferase | DW150_15225 | Not Available | Negative | 3687013 - 3687726 | 27706.8 |
| glycosyltransferase family 1 protein | DW150_15230 | Not Available | Negative | 3687735 - 3688829 | 41323.6 |
| glycosyl transferase | DW150_15235 | Not Available | Negative | 3688831 - 3690744 | 74898.3 |
| glycosyltransferase | DW150_15240 | Not Available | Negative | 3690815 - 3691849 | 40918.7 |
| acyltransferase | DW150_15245 | Not Available | Negative | 3691830 - 3692564 | 27770.9 |
| nad-dependent epimerase/dehydratase family protein | DW150_15250 | Not Available | Negative | 3692880 - 3693899 | 37897.4 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DW150_15255 | Not Available | Negative | 3693907 - 3694623 | 26400.9 |
| licd family protein | DW150_15260 | Not Available | Negative | 3694688 - 3695578 | 35972.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

