Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW150_14960 | Not Available | Negative | 3621643 - 3622476 | 32279.8 |
| efflux rnd transporter periplasmic adaptor subunit | DW150_14965 | Not Available | Positive | 3622624 - 3623739 | 40127.3 |
| acrb/acrd/acrf family protein | DW150_14970 | Not Available | Positive | 3623747 - 3626962 | 117303.0 |
| tolc family protein | DW150_14975 | Not Available | Positive | 3626959 - 3628332 | 50237.7 |
| duf4934 domain-containing protein | DW150_14980 | Not Available | Negative | 3628413 - 3629645 | 46019.7 |
| duf3332 domain-containing protein | DW150_14985 | Not Available | Negative | 3629726 - 3630277 | 19842.5 |
| mfs transporter | DW150_14990 | Not Available | Positive | 3630451 - 3631839 | 51181.4 |
| duf4831 family protein | DW150_14995 | Not Available | Negative | 3631921 - 3632970 | 38702.6 |
| nad(p)h-hydrate dehydratase | DW150_15000 | Not Available | Negative | 3633007 - 3634542 | 56217.5 |
| hypoxanthine phosphoribosyltransferase | DW150_15005 | Not Available | Positive | 3634662 - 3635198 | 20092.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

