Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerate kinase | DW150_14660 | Not Available | Negative | 3561010 - 3562149 | 39726.6 |
| hypothetical protein | DW150_14665 | Not Available | Positive | 3562807 - 3563211 | 15177.7 |
| mota/tolq/exbb proton channel family protein | DW150_14670 | Not Available | Positive | 3563318 - 3564133 | 28995.6 |
| biopolymer transporter exbd | DW150_14675 | Not Available | Positive | 3564162 - 3564767 | 22782.7 |
| biopolymer transporter exbd | DW150_14680 | Not Available | Positive | 3564780 - 3565430 | 24304.2 |
| energy transducer tonb | DW150_14685 | Not Available | Positive | 3565460 - 3566272 | 30321.8 |
| phosphate abc transporter substrate-binding protein | DW150_14690 | Not Available | Positive | 3566280 - 3567221 | 34391.6 |
| hypothetical protein | DW150_14695 | Not Available | Positive | 3567245 - 3568660 | 53766.4 |
| atp-binding cassette domain-containing protein | DW150_14700 | Not Available | Positive | 3568845 - 3569687 | 31517.3 |
| hypothetical protein | DW150_14705 | Not Available | Positive | 3569700 - 3570590 | 34307.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

