Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_14555 | Not Available | Positive | 3536667 - 3536861 | 7709.75 |
| hypothetical protein | DW150_14560 | Not Available | Positive | 3536879 - 3537379 | 19308.6 |
| duf4906 domain-containing protein | DW150_14565 | Not Available | Negative | 3537641 - 3540901 | 123363.0 |
| duf5042 domain-containing protein | DW150_14570 | Not Available | Negative | 3540939 - 3542342 | 53186.3 |
| hypothetical protein | DW150_14575 | Not Available | Negative | 3542351 - 3543268 | 34451.8 |
| hypothetical protein | DW150_14580 | Not Available | Negative | 3543461 - 3544882 | 50906.2 |
| hypothetical protein | DW150_14585 | Not Available | Negative | 3544968 - 3546434 | 55736.7 |
| duf3575 domain-containing protein | DW150_14590 | Not Available | Negative | 3546494 - 3547090 | 22874.6 |
| hypothetical protein | DW150_14595 | Not Available | Negative | 3547586 - 3548248 | 26089.2 |
| arac family transcriptional regulator | DW150_14600 | Not Available | Negative | 3548292 - 3549146 | 33338.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

