Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-ribbon domain-containing protein | DW150_14405 | Not Available | Positive | 3500438 - 3501868 | 53322.5 |
| wg repeat-containing protein | DW150_14410 | Not Available | Positive | 3501895 - 3503064 | 42679.5 |
| hypothetical protein | DW150_14415 | Not Available | Positive | 3503134 - 3503913 | 29073.4 |
| hypothetical protein | DW150_14420 | Not Available | Positive | 3503980 - 3504510 | 20567.1 |
| hypothetical protein | DW150_14425 | Not Available | Positive | 3504669 - 3505466 | 31872.7 |
| helicase | DW150_14430 | Not Available | Positive | 3505820 - 3506836 | 39021.7 |
| porin family protein | DW150_14435 | Not Available | Positive | 3507336 - 3507935 | 21592.3 |
| primosomal protein n' | DW150_14440 | Not Available | Positive | 3508008 - 3510470 | 93914.2 |
| phosphatase | DW150_14445 | Not Available | Positive | 3510518 - 3511228 | 26532.1 |
| low molecular weight phosphotyrosine protein phosphatase | DW150_14450 | Not Available | Positive | 3511236 - 3511706 | 17874.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

