Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2795 domain-containing protein | DW150_14355 | Not Available | Positive | 3493312 - 3493533 | 8716.91 |
| recombinase | DW150_14360 | Not Available | Positive | 3493696 - 3495036 | 51548.3 |
| dna-binding protein | DW150_14365 | Not Available | Negative | 3495033 - 3495323 | 11563.6 |
| hypothetical protein | DW150_14370 | Not Available | Negative | 3495583 - 3496653 | 41989.2 |
| hypothetical protein | DW150_14375 | Not Available | Negative | 3497203 - 3497445 | 9245.04 |
| hypothetical protein | DW150_14380 | Not Available | Positive | 3497616 - 3497894 | 10548.2 |
| duf2693 domain-containing protein | DW150_14385 | Not Available | Positive | 3497930 - 3498262 | 12578.2 |
| serine recombinase | DW150_14390 | Not Available | Positive | 3498326 - 3498994 | 25269.8 |
| zinc ribbon domain-containing protein | DW150_14395 | Not Available | Positive | 3499367 - 3500101 | 26545.2 |
| cd225/dispanin family protein | DW150_14400 | Not Available | Positive | 3500118 - 3500528 | 15508.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

