Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DW150_14305 | Not Available | Negative | 3484746 - 3485267 | 20124.9 |
| gnat family n-acetyltransferase | DW150_14310 | Not Available | Negative | 3485285 - 3485716 | 16235.8 |
| n-acetyltransferase | DW150_14315 | Not Available | Positive | 3485821 - 3486306 | 18657.5 |
| duf488 family protein | DW150_14320 | Not Available | Positive | 3486380 - 3486736 | 14218.8 |
| acetyl-coa carboxylase biotin carboxylase subunit | DW150_14325 | Not Available | Positive | 3486913 - 3488424 | 56985.6 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DW150_14330 | Not Available | Positive | 3488449 - 3488964 | 19041.9 |
| acyl-coa carboxylase subunit beta | DW150_14335 | Not Available | Positive | 3488967 - 3490499 | 55881.1 |
| aminopeptidase | DW150_14340 | Not Available | Negative | 3490630 - 3491940 | 50844.7 |
| hypothetical protein | DW150_14345 | Not Available | Positive | 3492045 - 3492668 | 24607.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DW150_14350 | Not Available | Positive | 3492677 - 3493240 | 21320.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

