Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin | DW150_14190 | Not Available | Negative | 3461820 - 3462302 | 17950.3 |
| 30s ribosomal protein s16 | DW150_14195 | Not Available | Positive | 3462510 - 3463061 | 19876.5 |
| rpn family recombination-promoting nuclease/putative transposase | DW150_14200 | Not Available | Negative | 3463134 - 3464039 | 34835.6 |
| duf5017 domain-containing protein | DW150_14205 | Not Available | Negative | 3464440 - 3466332 | 69714.6 |
| tonb-dependent receptor | DW150_14210 | Not Available | Negative | 3466354 - 3468951 | 95786.9 |
| hypothetical protein | DW150_14215 | Not Available | Negative | 3469351 - 3469560 | 8389.02 |
| hypothetical protein | DW150_14220 | Not Available | Negative | 3469864 - 3470067 | 7852.31 |
| duf3987 domain-containing protein | DW150_14230 | Not Available | Positive | 3470839 - 3472668 | 68504.1 |
| duf4248 domain-containing protein | DW150_14235 | Not Available | Negative | 3472824 - 3473099 | 10417.8 |
| dna-binding protein | DW150_14240 | Not Available | Positive | 3473375 - 3473863 | 17517.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

