Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna alkylation repair protein | DW150_14140 | Not Available | Positive | 3449910 - 3450626 | 28348.4 |
| n-glycanase | DW150_14145 | Not Available | Negative | 3450731 - 3451981 | 46683.0 |
| duf4301 family protein | DW150_14150 | Not Available | Negative | 3452101 - 3453618 | 56784.2 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DW150_14155 | Not Available | Positive | 3453762 - 3455975 | 84511.3 |
| diacylglycerol kinase family protein | DW150_14160 | Not Available | Positive | 3455996 - 3456349 | 13013.2 |
| duf1573 domain-containing protein | DW150_14165 | Not Available | Positive | 3456444 - 3456857 | 14871.0 |
| metallophosphoesterase | DW150_14170 | Not Available | Positive | 3457070 - 3457876 | 31228.2 |
| hypothetical protein | DW150_14175 | Not Available | Positive | 3457842 - 3458603 | 29994.0 |
| oligopeptide transporter, opt family | DW150_14180 | Not Available | Positive | 3458689 - 3460680 | 70043.7 |
| alpha/beta hydrolase | DW150_14185 | Not Available | Positive | 3460714 - 3461559 | 30900.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

