Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-alpha-glucanotransferase | DW150_14085 | Not Available | Negative | 3435897 - 3437837 | 74802.1 |
| rhomboid family intramembrane serine protease | DW150_14090 | Not Available | Positive | 3438018 - 3438686 | 25247.9 |
| hypothetical protein | DW150_14095 | Not Available | Positive | 3439245 - 3440579 | 50205.8 |
| peptidase m75 | DW150_14100 | Not Available | Positive | 3440613 - 3441794 | 42892.1 |
| hypothetical protein | DW150_14110 | Not Available | Positive | 3442030 - 3443649 | 61593.9 |
| cytochrome c biogenesis protein | DW150_14115 | Not Available | Positive | 3443769 - 3446021 | 86246.4 |
| formate-dependent phosphoribosylglycinamide formyltransferase | DW150_14120 | Not Available | Negative | 3446561 - 3447730 | 42923.7 |
| pspc domain-containing protein | DW150_14125 | Not Available | Negative | 3447828 - 3448874 | 38130.5 |
| padr family transcriptional regulator | DW150_14130 | Not Available | Negative | 3448887 - 3449213 | 12513.1 |
| gnat family n-acetyltransferase | DW150_14135 | Not Available | Positive | 3449392 - 3449889 | 19289.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

