Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase type iii | DW150_14035 | Not Available | Positive | 3424828 - 3427017 | 82268.0 |
| atp-dependent dethiobiotin synthetase biod | DW150_14040 | Not Available | Negative | 3427134 - 3427778 | 24135.7 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DW150_14045 | Not Available | Negative | 3427793 - 3428548 | 28921.1 |
| duf452 family protein | DW150_14050 | Not Available | Negative | 3428560 - 3429213 | 25174.3 |
| 8-amino-7-oxononanoate synthase | DW150_14055 | Not Available | Negative | 3429210 - 3430361 | 43022.2 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DW150_14060 | Not Available | Negative | 3430389 - 3431660 | 47734.2 |
| biotin synthase biob | DW150_14065 | Not Available | Negative | 3431699 - 3432658 | 35386.7 |
| hypothetical protein | DW150_14070 | Not Available | Negative | 3432655 - 3433035 | 14576.0 |
| alpha-amylase | DW150_14075 | Not Available | Negative | 3433186 - 3434598 | 53816.6 |
| glycosyltransferase family 1 protein | DW150_14080 | Not Available | Negative | 3434617 - 3435882 | 47627.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

