Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate utilization protein | DW150_13885 | Not Available | Negative | 3390205 - 3391572 | 51582.4 |
| (fe-s)-binding protein | DW150_13890 | Not Available | Negative | 3391569 - 3392309 | 27309.1 |
| dna-binding response regulator | DW150_13895 | Not Available | Negative | 3392621 - 3393232 | 22681.6 |
| hemerythrin domain-containing protein | DW150_13900 | Not Available | Negative | 3393229 - 3393924 | 26970.4 |
| tryptophan-rich sensory protein | DW150_13905 | Not Available | Negative | 3394051 - 3394515 | 18099.9 |
| dna-binding response regulator | DW150_13910 | Not Available | Negative | 3394800 - 3395525 | 27868.8 |
| histidine kinase | DW150_13915 | Not Available | Negative | 3395522 - 3396577 | 40239.1 |
| abc transporter permease | DW150_13920 | Not Available | Negative | 3396775 - 3397995 | 44112.1 |
| abc transporter atp-binding protein | DW150_13925 | Not Available | Negative | 3398014 - 3398757 | 27191.8 |
| efflux rnd transporter periplasmic adaptor subunit | DW150_13930 | Not Available | Negative | 3398795 - 3400018 | 43937.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

