Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s13 | DW150_13670 | Not Available | Positive | 3330986 - 3331366 | 14121.3 |
| 30s ribosomal protein s11 | DW150_13675 | Not Available | Positive | 3331378 - 3331767 | 13878.8 |
| 30s ribosomal protein s4 | DW150_13680 | Not Available | Positive | 3331884 - 3332489 | 22540.2 |
| dna-directed rna polymerase subunit alpha | DW150_13685 | Not Available | Positive | 3332501 - 3333493 | 37535.1 |
| 50s ribosomal protein l17 | DW150_13690 | Not Available | Positive | 3333497 - 3333985 | 17965.6 |
| hypothetical protein | DW150_13695 | Not Available | Positive | 3334398 - 3334823 | 15859.1 |
| hypothetical protein | DW150_13700 | Not Available | Positive | 3334941 - 3335480 | 19832.8 |
| hypothetical protein | DW150_13705 | Not Available | Negative | 3335575 - 3337374 | 68592.7 |
| hypothetical protein | DW150_13710 | Not Available | Positive | 3337704 - 3338375 | 24007.7 |
| duf4252 domain-containing protein | DW150_13715 | Not Available | Negative | 3338630 - 3339088 | 17361.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

