Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s8 | DW150_13620 | Not Available | Positive | 3325915 - 3326310 | 14565.0 |
| 50s ribosomal protein l6 | DW150_13625 | Not Available | Positive | 3326325 - 3326894 | 20924.5 |
| 50s ribosomal protein l18 | DW150_13630 | Not Available | Positive | 3326916 - 3327257 | 12645.5 |
| 30s ribosomal protein s5 | DW150_13635 | Not Available | Positive | 3327261 - 3327779 | 17941.0 |
| 50s ribosomal protein l30 | DW150_13640 | Not Available | Positive | 3327789 - 3327965 | 6491.25 |
| 50s ribosomal protein l15 | DW150_13645 | Not Available | Positive | 3327996 - 3328442 | 15681.0 |
| preprotein translocase subunit secy | DW150_13650 | Not Available | Positive | 3328447 - 3329793 | 49282.7 |
| type i methionyl aminopeptidase | DW150_13655 | Not Available | Positive | 3329804 - 3330601 | 29127.1 |
| translation initiation factor if-1 | DW150_13660 | Not Available | Positive | 3330603 - 3330821 | 8235.14 |
| 50s ribosomal protein l36 | DW150_13665 | Not Available | Positive | 3330836 - 3330952 | 4586.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

