Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s19 | DW150_13570 | Not Available | Positive | 3321902 - 3322171 | 9895.23 |
| 50s ribosomal protein l22 | DW150_13575 | Not Available | Positive | 3322208 - 3322618 | 15484.9 |
| 30s ribosomal protein s3 | DW150_13580 | Not Available | Positive | 3322625 - 3323356 | 27103.1 |
| 50s ribosomal protein l16 | DW150_13585 | Not Available | Positive | 3323378 - 3323812 | 16206.8 |
| 50s ribosomal protein l29 | DW150_13590 | Not Available | Positive | 3323819 - 3324013 | 7453.1 |
| 30s ribosomal protein s17 | DW150_13595 | Not Available | Positive | 3324025 - 3324282 | 9981.21 |
| 50s ribosomal protein l14 | DW150_13600 | Not Available | Positive | 3324285 - 3324650 | 13058.1 |
| 50s ribosomal protein l24 | DW150_13605 | Not Available | Positive | 3324671 - 3324994 | 11644.1 |
| 50s ribosomal protein l5 | DW150_13610 | Not Available | Positive | 3324994 - 3325551 | 20860.8 |
| 30s ribosomal protein s14 | DW150_13615 | Not Available | Positive | 3325558 - 3325857 | 11077.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

