Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta' | DW150_13520 | Not Available | Positive | 3310871 - 3315157 | 158846.0 |
| duf3467 domain-containing protein | DW150_13525 | Not Available | Positive | 3315366 - 3315707 | 12561.0 |
| 30s ribosomal protein s12 | DW150_13530 | Not Available | Positive | 3315897 - 3316310 | 15022.4 |
| 30s ribosomal protein s7 | DW150_13535 | Not Available | Positive | 3316459 - 3316935 | 18220.1 |
| elongation factor g | DW150_13540 | Not Available | Positive | 3316967 - 3319084 | 77517.6 |
| 30s ribosomal protein s10 | DW150_13545 | Not Available | Positive | 3319170 - 3319475 | 11419.0 |
| 50s ribosomal protein l3 | DW150_13550 | Not Available | Positive | 3319497 - 3320114 | 21930.8 |
| 50s ribosomal protein l4 | DW150_13555 | Not Available | Positive | 3320114 - 3320740 | 23075.8 |
| 50s ribosomal protein l23 | DW150_13560 | Not Available | Positive | 3320762 - 3321052 | 10804.2 |
| 50s ribosomal protein l2 | DW150_13565 | Not Available | Positive | 3321058 - 3321879 | 29620.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

