Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 3302539 - 3302610 | Not Available |
| elongation factor tu | DW150_13475 | Not Available | Positive | 3302662 - 3303846 | 43551.6 |
| Trna-trp | Not Available | Not Available | Positive | 3303905 - 3303980 | Not Available |
| preprotein translocase subunit sece | DW150_13485 | Not Available | Positive | 3303994 - 3304188 | 7430.12 |
| transcription termination/antitermination factor nusg | DW150_13490 | Not Available | Positive | 3304202 - 3304744 | 20124.3 |
| 50s ribosomal protein l11 | DW150_13495 | Not Available | Positive | 3304805 - 3305248 | 15767.4 |
| 50s ribosomal protein l1 | DW150_13500 | Not Available | Positive | 3305264 - 3305962 | 24921.5 |
| 50s ribosomal protein l10 | DW150_13505 | Not Available | Positive | 3305978 - 3306496 | 18736.8 |
| 50s ribosomal protein l7/l12 | DW150_13510 | Not Available | Positive | 3306543 - 3306917 | 12654.2 |
| dna-directed rna polymerase subunit beta | DW150_13515 | Not Available | Positive | 3307020 - 3310832 | 142493.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

