Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DW150_13420 | Not Available | Negative | 3296577 - 3297530 | 36616.8 |
| porin family protein | DW150_13425 | Not Available | Negative | 3297645 - 3298136 | 18147.7 |
| gamma carbonic anhydrase family protein | DW150_13430 | Not Available | Negative | 3298182 - 3298706 | 18518.4 |
| aminopeptidase p family protein | DW150_13435 | Not Available | Negative | 3298716 - 3300497 | 66783.2 |
| 30s ribosomal protein s21 | DW150_13440 | Not Available | Positive | 3300666 - 3300857 | 7526.36 |
| recombinase | DW150_13445 | Not Available | Positive | 3300935 - 3301816 | 34007.6 |
| ribosome-associated translation inhibitor raia | DW150_13450 | Not Available | Positive | 3301831 - 3302130 | 11345.7 |
| Trna-thr | Not Available | Not Available | Positive | 3302228 - 3302304 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 3302342 - 3302424 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3302456 - 3302528 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

