Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_13370 | Not Available | Negative | 3290232 - 3290426 | 7202.75 |
| single-stranded dna-binding protein | DW150_13375 | Not Available | Positive | 3290640 - 3291023 | 14379.1 |
| hypothetical protein | DW150_13380 | Not Available | Positive | 3291404 - 3291931 | 20778.0 |
| hypothetical protein | DW150_13385 | Not Available | Positive | 3292358 - 3293047 | 26783.4 |
| nitrate abc transporter permease | DW150_13390 | Not Available | Positive | 3293275 - 3293493 | 7782.63 |
| hypothetical protein | DW150_13395 | Not Available | Positive | 3293517 - 3293831 | 12695.8 |
| hypothetical protein | DW150_13400 | Not Available | Negative | 3293891 - 3294283 | 15136.8 |
| hu family dna-binding protein | DW150_13405 | Not Available | Negative | 3294381 - 3294662 | 10206.7 |
| mate family efflux transporter | DW150_13410 | Not Available | Positive | 3294880 - 3296259 | 50141.2 |
| hypothetical protein | DW150_13415 | Not Available | Positive | 3296455 - 3296541 | 3439.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

