Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DW150_13110 | Not Available | Positive | 3238147 - 3238722 | 21419.5 |
| amp-binding protein | DW150_13115 | Not Available | Positive | 3238729 - 3240381 | 62239.3 |
| transporter | DW150_13120 | Not Available | Negative | 3240914 - 3242263 | 50809.6 |
| glycoside hydrolase family 28 protein | DW150_13125 | Not Available | Negative | 3242441 - 3243838 | 51771.1 |
| hypothetical protein | DW150_13130 | Not Available | Negative | 3244098 - 3244301 | 7526.23 |
| hypothetical protein | DW150_13135 | Not Available | Negative | 3244246 - 3244368 | 4338.15 |
| hypothetical protein | DW150_13140 | Not Available | Negative | 3244807 - 3245169 | 14008.9 |
| hypothetical protein | DW150_13150 | Not Available | Negative | 3245599 - 3245808 | 7822.24 |
| hypothetical protein | DW150_13155 | Not Available | Positive | 3246098 - 3246778 | 25709.3 |
| class i sam-dependent methyltransferase | DW150_13160 | Not Available | Negative | 3246889 - 3247383 | 19054.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

