Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_13050 | Not Available | Positive | 3224841 - 3225050 | 8280.6 |
| kama family protein | DW150_13055 | Not Available | Positive | 3225143 - 3227236 | 81158.2 |
| tonb-dependent receptor | DW150_13060 | Not Available | Negative | 3227325 - 3229658 | 87135.7 |
| hypothetical protein | DW150_13065 | Not Available | Negative | 3229789 - 3230127 | 12752.8 |
| bifunctional metallophosphatase/5'-nucleotidase | DW150_13070 | Not Available | Negative | 3230132 - 3231874 | 65500.8 |
| sensor histidine kinase | DW150_13075 | Not Available | Negative | 3231879 - 3233888 | 75865.6 |
| j domain-containing protein | DW150_13080 | Not Available | Positive | 3233935 - 3234906 | 35196.0 |
| hypothetical protein | DW150_13085 | Not Available | Positive | 3234922 - 3235209 | 11311.5 |
| yihy/virulence factor brkb family protein | DW150_13100 | Not Available | Positive | 3235879 - 3237207 | 50603.4 |
| riboflavin synthase | DW150_13105 | Not Available | Negative | 3237340 - 3237942 | 22603.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

