Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy-dependent translational throttle protein etta | DW150_12950 | Not Available | Negative | 3196533 - 3198221 | 63680.2 |
| mfs transporter | DW150_12955 | Not Available | Negative | 3198259 - 3199425 | 43786.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DW150_12960 | Not Available | Negative | 3199440 - 3200261 | 29550.9 |
| had family hydrolase | DW150_12965 | Not Available | Negative | 3200314 - 3200964 | 24515.2 |
| mate family efflux transporter | DW150_12970 | Not Available | Positive | 3201054 - 3202406 | 49413.8 |
| potassium/proton antiporter | DW150_12975 | Not Available | Positive | 3202403 - 3203851 | 52825.6 |
| divalent metal cation transporter | DW150_12980 | Not Available | Negative | 3203926 - 3205179 | 45688.0 |
| hypothetical protein | DW150_12985 | Not Available | Positive | 3205282 - 3205680 | 15077.6 |
| clostripain | DW150_12990 | Not Available | Negative | 3205664 - 3206926 | 46804.4 |
| hypothetical protein | DW150_12995 | Not Available | Negative | 3206937 - 3207338 | 15385.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

