Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_12735 | Not Available | Positive | 3161741 - 3162280 | 20192.3 |
| hypothetical protein | DW150_12740 | Not Available | Negative | 3162307 - 3163842 | 60836.6 |
| glycosyltransferase family 2 protein | DW150_12745 | Not Available | Negative | 3163846 - 3164547 | 26851.9 |
| hypothetical protein | DW150_12750 | Not Available | Negative | 3164629 - 3164877 | 8948.3 |
| his-xaa-ser system radical sam maturase hxsc | DW150_12755 | Not Available | Negative | 3164911 - 3166056 | 43474.2 |
| hypothetical protein | DW150_12760 | Not Available | Negative | 3166059 - 3166496 | 16601.8 |
| his-xaa-ser system radical sam maturase hxsb | DW150_12765 | Not Available | Negative | 3166534 - 3167958 | 55195.1 |
| his-xaa-ser system protein hxsd | DW150_12770 | Not Available | Negative | 3167963 - 3168295 | 12752.3 |
| hypothetical protein | DW150_12785 | Not Available | Positive | 3169221 - 3169604 | 15013.2 |
| conjugative transposon protein tram | DW150_12790 | Not Available | Positive | 3169677 - 3170828 | 42834.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

