Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DW150_12670 | Not Available | Negative | 3150524 - 3150835 | 11989.4 |
| hypothetical protein | DW150_12675 | Not Available | Negative | 3151009 - 3152199 | 44324.4 |
| integrase | DW150_12680 | Not Available | Negative | 3152210 - 3153580 | 52219.6 |
| site-specific integrase | DW150_12695 | Not Available | Positive | 3154719 - 3155831 | 42169.6 |
| site-specific integrase | DW150_12700 | Not Available | Positive | 3155851 - 3157002 | 44318.7 |
| hypothetical protein | DW150_12705 | Not Available | Positive | 3157047 - 3157949 | 34192.1 |
| dna-binding protein | DW150_12710 | Not Available | Positive | 3158262 - 3158495 | 9039.12 |
| hypothetical protein | DW150_12715 | Not Available | Positive | 3158532 - 3159023 | 17821.9 |
| hypothetical protein | DW150_12720 | Not Available | Positive | 3159274 - 3159708 | 16494.6 |
| relaxase | DW150_12730 | Not Available | Positive | 3160445 - 3161716 | 48618.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

