Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4133 domain-containing protein | DW150_12570 | Not Available | Positive | 3126440 - 3126736 | 10763.6 |
| duf87 domain-containing protein | DW150_12575 | Not Available | Positive | 3126843 - 3129548 | 104150.0 |
| hypothetical protein | DW150_12580 | Not Available | Positive | 3129573 - 3129983 | 16150.3 |
| hypothetical protein | DW150_12585 | Not Available | Positive | 3130014 - 3132572 | 96787.5 |
| hypothetical protein | DW150_12590 | Not Available | Positive | 3132569 - 3133291 | 27719.5 |
| site-specific dna-methyltransferase | DW150_12595 | Not Available | Positive | 3133447 - 3134205 | 29164.9 |
| duf5045 domain-containing protein | DW150_12600 | Not Available | Positive | 3134281 - 3135048 | 28462.5 |
| hypothetical protein | DW150_12605 | Not Available | Positive | 3135062 - 3135763 | 26207.7 |
| atp-binding protein | DW150_12610 | Not Available | Positive | 3136106 - 3137404 | 49366.3 |
| rlob domain-containing protein | DW150_12615 | Not Available | Positive | 3137409 - 3138017 | 24134.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

