Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_12515 | Not Available | Positive | 3119114 - 3119584 | 18210.8 |
| hypothetical protein | DW150_12520 | Not Available | Positive | 3119712 - 3120113 | 15408.7 |
| site-specific integrase | DW150_12525 | Not Available | Positive | 3120292 - 3121422 | 43311.7 |
| hypothetical protein | DW150_12535 | Not Available | Positive | 3121680 - 3122324 | 24069.1 |
| dna-binding protein | DW150_12540 | Not Available | Positive | 3122493 - 3122897 | 15856.3 |
| mobilization protein | DW150_12545 | Not Available | Positive | 3122875 - 3123999 | 42340.5 |
| zf-chc2 and toprim domain-containing protein | DW150_12550 | Not Available | Positive | 3124081 - 3124968 | 33898.5 |
| hypothetical protein | DW150_12555 | Not Available | Positive | 3125210 - 3125659 | 16619.7 |
| duf4134 domain-containing protein | DW150_12560 | Not Available | Positive | 3125661 - 3125987 | 11554.5 |
| duf4134 domain-containing protein | DW150_12565 | Not Available | Positive | 3126062 - 3126427 | 12996.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

