Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4406 domain-containing protein | DW150_12410 | Not Available | Positive | 3104638 - 3104994 | 13195.0 |
| hypothetical protein | DW150_12415 | Not Available | Positive | 3105133 - 3105333 | 7850.68 |
| hypothetical protein | DW150_12420 | Not Available | Positive | 3105345 - 3105743 | 15613.3 |
| hypothetical protein | DW150_12425 | Not Available | Positive | 3105763 - 3106026 | 10384.2 |
| hypothetical protein | DW150_12430 | Not Available | Positive | 3106146 - 3106535 | 15239.4 |
| hypothetical protein | DW150_12435 | Not Available | Positive | 3106604 - 3107053 | 17068.3 |
| hypothetical protein | DW150_12445 | Not Available | Positive | 3107885 - 3108526 | 24701.1 |
| hypothetical protein | DW150_12450 | Not Available | Positive | 3108528 - 3108986 | 17794.8 |
| hypothetical protein | DW150_12455 | Not Available | Positive | 3108983 - 3109423 | 17299.1 |
| hypothetical protein | DW150_12460 | Not Available | Positive | 3109439 - 3109621 | 6905.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

