Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DW150_12310 | Not Available | Positive | 3088727 - 3090013 | 46238.9 |
| l-lactate permease | DW150_12315 | Not Available | Positive | 3090277 - 3091776 | 52986.5 |
| histone h1 | DW150_12320 | Not Available | Positive | 3091947 - 3092120 | 6352.79 |
| duf5113 domain-containing protein | DW150_12325 | Not Available | Positive | 3092269 - 3096666 | 168941.0 |
| dna-binding response regulator | DW150_12330 | Not Available | Positive | 3096696 - 3097424 | 27616.5 |
| transporter | DW150_12335 | Not Available | Positive | 3097414 - 3098121 | 26595.3 |
| Trna-arg | Not Available | Not Available | Positive | 3098199 - 3098272 | Not Available |
| hypothetical protein | DW150_12345 | Not Available | Positive | 3098448 - 3099656 | 46752.9 |
| hypothetical protein | DW150_12350 | Not Available | Negative | 3099905 - 3100156 | 9498.27 |
| hypothetical protein | DW150_12355 | Not Available | Negative | 3100309 - 3100539 | 8696.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

