Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-glcnacase | DW150_11880 | Not Available | Negative | 2956981 - 2959194 | 84922.3 |
| recq family atp-dependent dna helicase | DW150_11885 | Not Available | Negative | 2959241 - 2961136 | 72994.1 |
| single-stranded-dna-specific exonuclease recj | DW150_11890 | Not Available | Negative | 2961254 - 2963026 | 66543.4 |
| aminopeptidase | DW150_11895 | Not Available | Negative | 2963141 - 2964352 | 45970.4 |
| aminopeptidase p family protein | DW150_11900 | Not Available | Negative | 2964381 - 2965772 | 51756.3 |
| patatin family protein | DW150_11905 | Not Available | Positive | 2966102 - 2966956 | 32924.3 |
| hypothetical protein | DW150_11910 | Not Available | Negative | 2967091 - 2967891 | 30056.0 |
| ribonuclease y | DW150_11915 | Not Available | Negative | 2968081 - 2969616 | 57327.7 |
| cell division protein zapa | DW150_11920 | Not Available | Negative | 2969717 - 2970010 | 11772.0 |
| hypothetical protein | DW150_11925 | Not Available | Negative | 2970040 - 2970333 | 11754.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

