Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_10300 | Not Available | Positive | 2491403 - 2492059 | 25622.6 |
| zinc ribbon domain-containing protein | DW150_10305 | Not Available | Positive | 2492265 - 2494562 | 90354.4 |
| hypothetical protein | DW150_10315 | Not Available | Positive | 2495508 - 2495780 | 10428.4 |
| dna repair protein | DW150_10320 | Not Available | Positive | 2495868 - 2496314 | 16770.2 |
| site-specific integrase | DW150_10325 | Not Available | Positive | 2496470 - 2497057 | 22586.9 |
| hypothetical protein | DW150_10335 | Not Available | Positive | 2497798 - 2498157 | 14085.0 |
| hypothetical protein | DW150_10340 | Not Available | Positive | 2498197 - 2498535 | 12849.7 |
| hypothetical protein | DW150_10345 | Not Available | Positive | 2498545 - 2499753 | 45689.5 |
| hypothetical protein | DW150_10350 | Not Available | Negative | 2499818 - 2500189 | 14121.8 |
| hypothetical protein | DW150_10355 | Not Available | Negative | 2500222 - 2500434 | 8288.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

