Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_10245 | Not Available | Negative | 2480668 - 2480862 | 7370.45 |
| bifunctional dihydroorotate dehydrogenase b nad binding subunit/nadph-dependent glutamate synthase | DW150_10250 | Not Available | Positive | 2480896 - 2483193 | 82921.6 |
| is1182 family transposase | DW150_10255 | Not Available | Negative | 2483282 - 2484943 | 65158.6 |
| duf4858 domain-containing protein | DW150_10260 | Not Available | Positive | 2485423 - 2486193 | 29526.6 |
| recombinase family protein | DW150_10270 | Not Available | Positive | 2486423 - 2488237 | 70205.8 |
| hypothetical protein | DW150_10275 | Not Available | Positive | 2488295 - 2489140 | 32885.3 |
| hypothetical protein | DW150_10280 | Not Available | Negative | 2489118 - 2489303 | 7229.85 |
| hypothetical protein | DW150_10285 | Not Available | Positive | 2489425 - 2490516 | 40915.7 |
| hypothetical protein | DW150_10290 | Not Available | Positive | 2490581 - 2490898 | 12403.9 |
| hypothetical protein | DW150_10295 | Not Available | Positive | 2491258 - 2491449 | 7537.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

