Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | DW150_10145 | Not Available | Positive | 2457629 - 2458867 | 47084.8 |
| class i sam-dependent methyltransferase | DW150_10150 | Not Available | Positive | 2458924 - 2459712 | 30883.2 |
| metallophosphoesterase | DW150_10155 | Not Available | Positive | 2459814 - 2460899 | 41138.4 |
| class i sam-dependent rrna methyltransferase | DW150_10160 | Not Available | Negative | 2461590 - 2462774 | 44509.2 |
| 3'-5' exonuclease domain-containing protein 2 | DW150_10165 | Not Available | Negative | 2462764 - 2463414 | 24635.5 |
| duf5063 domain-containing protein | DW150_10170 | Not Available | Negative | 2463411 - 2463974 | 21633.7 |
| dna translocase ftsk | DW150_10175 | Not Available | Positive | 2464079 - 2466544 | 91841.1 |
| hypothetical protein | DW150_10180 | Not Available | Positive | 2466561 - 2467175 | 23059.4 |
| thioredoxin-disulfide reductase | DW150_10185 | Not Available | Positive | 2467240 - 2468187 | 33986.5 |
| insulinase family protein | DW150_10190 | Not Available | Positive | 2468218 - 2471037 | 106154.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

