Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DW150_10095 | Not Available | Negative | 2447483 - 2448184 | 26175.7 |
| dna helicase uvrb | DW150_10100 | Not Available | Negative | 2448213 - 2448779 | 21412.8 |
| mfs transporter | DW150_10105 | Not Available | Negative | 2448839 - 2450116 | 46722.2 |
| duf5024 domain-containing protein | DW150_10110 | Not Available | Negative | 2450318 - 2450932 | 23068.8 |
| hypothetical protein | DW150_10115 | Not Available | Negative | 2450952 - 2451518 | 21167.2 |
| sigma-70 family rna polymerase sigma factor | DW150_10120 | Not Available | Negative | 2451509 - 2451979 | 18009.0 |
| galactose mutarotase | DW150_10125 | Not Available | Negative | 2452165 - 2453298 | 42097.7 |
| duf3857 domain-containing protein | DW150_10130 | Not Available | Negative | 2453424 - 2454983 | 56851.9 |
| duf3857 domain-containing protein | DW150_10135 | Not Available | Negative | 2454990 - 2456945 | 73909.5 |
| sigma-70 family rna polymerase sigma factor | DW150_10140 | Not Available | Positive | 2457087 - 2457632 | 20698.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

